PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009612742.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 273aa    MW: 31022.1 Da    PI: 6.1023
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009612742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.12.2e-16421712128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk....kvkaeekew..yfFskrdkkyatgkrknr.atksgyWkatg 87 
                       GfrF+P+d+e +  +L + v+g+++  + +  ++vd+y k ePw++ +    + + e+++   +f +k +k + ++ r +r + ++g Wk+  
  XP_009612742.1  42 EEGFRFRPKDSEGL-TFLLRFVAGQEMYDAGFiTTNVDVYgKQEPWEIYEhgvpCGDDEDSSSypHFITKLKK-K-SNARYHRaVGNKGSWKQDA 133
                     68**********99.7888999999966657636677*99456*****7335543333444442345444444.4.45788884677******** PP

             NAM  88 kdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                     k k++++     +g k+ L + ++    ++ +  +W+m+ey+l
  XP_009612742.1 134 KGKPMVN-----IGSKTNLSYKNKefYPEDQKDGHWLMKEYEL 171
                     *****99.....66666666653321244445679******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-1531192IPR003441NAC domain
PROSITE profilePS5100518.96641194IPR003441NAC domain
PfamPF023655.5E-1143171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MENSLSCCGI GGSRDRGALF TLQEVAFLLR YSLLFIRHLE LEEGFRFRPK DSEGLTFLLR  60
FVAGQEMYDA GFITTNVDVY GKQEPWEIYE HGVPCGDDED SSSYPHFITK LKKKSNARYH  120
RAVGNKGSWK QDAKGKPMVN IGSKTNLSYK NKEFYPEDQK DGHWLMKEYE LSKVILHKFD  180
QDCRDYVLCA IKKLKHVNSS SETSTITTLN NVSDGTDEVT SSVDGLLATN NCKNYYNMCK  240
NLEHSEMMAF QESMVMNNSV VEPLQVVVVG PSE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009612742.10.0PREDICTED: NAC domain-containing protein 78-like, partial
TrEMBLM1D2T53e-66M1D2T5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000799907e-66(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-10NAC domain containing protein 32